SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 23)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12529531	0.80[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16884524	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs16884554	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4074910	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4076112	0.81[ASN][1000 genomes]
rs4130033	0.83[EUR][1000 genomes]
rs4574622	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6456397	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6901354	0.83[EUR][1000 genomes]
rs6916667	0.84[EUR][1000 genomes]
rs6927498	0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72838005	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72838010	0.89[EUR][1000 genomes]
rs9295495	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9366379	0.90[EUR][1000 genomes]
rs9460598	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9460599	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9465965	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9465966	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9465970	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9465971	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9465972	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9986662	0.84[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)