SNP Report

Basic Infomation

Name	rs9368219 dbSNP
Location	chr:6,20674691
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 64)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1040558	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs10440833	0.95[CHB][hapmap];0.91[JPT][hapmap];0.89[ASN][1000 genomes]
rs10946398	0.86[CHB][hapmap];0.85[JPT][hapmap]
rs10946402	0.87[EUR][1000 genomes]
rs10946403	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs11753081	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs12660618	0.88[EUR][1000 genomes]
rs2206734	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2328528	0.82[CHB][hapmap];0.82[JPT][hapmap]
rs2328529	0.81[JPT][hapmap]
rs2328545	0.82[CHB][hapmap];0.95[JPT][hapmap]
rs2328547	0.87[EUR][1000 genomes]
rs2328548	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs35261542	0.95[ASN][1000 genomes]
rs35612982	0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4710940	0.86[CHB][hapmap]
rs4710941	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4712522	0.86[CHB][hapmap]
rs4712523	0.86[CHB][hapmap];0.85[JPT][hapmap]
rs4712525	0.86[CHB][hapmap]
rs4712526	0.86[CHB][hapmap]
rs6456364	0.95[JPT][hapmap]
rs6456367	0.86[CHB][hapmap]
rs6456368	0.82[CHB][hapmap]
rs6456369	0.86[CHB][hapmap];0.85[JPT][hapmap]
rs6456371	0.83[EUR][1000 genomes]
rs67131976	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6906327	0.85[CHB][hapmap];0.85[JPT][hapmap]
rs6935599	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs6940200	0.82[CHB][hapmap]
rs72830699	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs742642	0.82[CHB][hapmap];0.87[JPT][hapmap]
rs7748382	0.86[CHB][hapmap]
rs7751957	0.82[CHB][hapmap];0.82[JPT][hapmap]
rs7752780	0.86[CHB][hapmap]
rs7752906	0.90[CHB][hapmap]
rs7754840	0.86[CHB][hapmap];0.85[JPT][hapmap]
rs7766070	1.00[CHB][hapmap];0.91[JPT][hapmap];0.87[ASN][1000 genomes]
rs7767391	0.93[CEU][hapmap];0.84[EUR][1000 genomes]
rs7768642	0.82[CHB][hapmap]
rs7772603	0.86[CHB][hapmap]
rs7774594	0.86[CHB][hapmap]
rs9295474	0.86[CHB][hapmap]
rs9295475	0.81[CHB][hapmap];0.95[JPT][hapmap]
rs9348440	0.81[CHB][hapmap];0.95[JPT][hapmap]
rs9348441	0.89[ASN][1000 genomes]
rs9350271	1.00[CHB][hapmap];0.90[JPT][hapmap];0.89[ASN][1000 genomes]
rs9350272	0.86[EUR][1000 genomes]
rs9356744	1.00[CHB][hapmap];0.91[JPT][hapmap];0.89[ASN][1000 genomes]
rs9358355	0.82[CHB][hapmap];0.87[JPT][hapmap]
rs9358356	0.86[CHB][hapmap]
rs9358357	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs9368216	0.81[CHB][hapmap];0.87[JPT][hapmap]
rs9368222	1.00[CHB][hapmap];0.90[JPT][hapmap];0.89[ASN][1000 genomes]
rs9368224	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs9368226	0.93[CEU][hapmap];0.85[EUR][1000 genomes]
rs9460544	0.86[CHB][hapmap]
rs9460545	0.86[CHB][hapmap]
rs9460546	0.86[CHB][hapmap];0.85[JPT][hapmap]
rs9460550	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs9465846	0.82[CHB][hapmap]
rs9465847	0.82[CHB][hapmap]
rs9465850	0.89[CHB][hapmap]
rs9465871	1.00[CEU][hapmap];0.86[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)