SNP Report

Basic Infomation

Name	rs9350271 dbSNP
Location	chr:6,20683164
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 49)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10440833	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs10946398	0.81[CHB][hapmap];0.94[JPT][hapmap]
rs1569699	0.95[CEU][hapmap];0.91[YRI][hapmap];0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2206734	1.00[CHB][hapmap];0.89[JPT][hapmap];0.97[ASN][1000 genomes]
rs2328528	0.82[CHB][hapmap]
rs2328545	0.82[CHB][hapmap];0.84[JPT][hapmap]
rs35261542	0.93[ASN][1000 genomes]
rs35612982	0.98[ASN][1000 genomes]
rs4710940	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs4710941	0.97[ASN][1000 genomes]
rs4712522	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs4712523	0.81[CHB][hapmap];0.94[JPT][hapmap]
rs4712525	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs4712526	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs6456364	0.84[JPT][hapmap]
rs6456367	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs6456368	0.85[JPT][hapmap]
rs6456369	0.81[CHB][hapmap];0.94[JPT][hapmap]
rs67131976	0.98[ASN][1000 genomes]
rs6901559	0.81[AFR][1000 genomes]
rs6906327	0.80[CHB][hapmap];0.94[JPT][hapmap]
rs6940200	0.82[CHB][hapmap]
rs742642	0.82[CHB][hapmap]
rs7748382	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs7751957	0.82[CHB][hapmap]
rs7752780	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs7752906	0.87[CHB][hapmap];0.84[JPT][hapmap]
rs7754840	0.81[CHB][hapmap];0.94[JPT][hapmap]
rs7756992	0.82[YRI][hapmap];0.81[EUR][1000 genomes]
rs7766070	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs7768642	0.82[CHB][hapmap]
rs7772603	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs7774594	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs9295474	0.82[CHB][hapmap]
rs9295475	0.81[CHB][hapmap];0.83[JPT][hapmap]
rs9348440	0.81[CHB][hapmap];0.83[JPT][hapmap]
rs9348441	1.00[ASN][1000 genomes]
rs9356744	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9358355	0.82[CHB][hapmap]
rs9358356	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs9368216	0.82[CHB][hapmap]
rs9368219	1.00[CHB][hapmap];0.90[JPT][hapmap];0.89[ASN][1000 genomes]
rs9368222	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9460544	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs9460545	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs9460546	0.81[CHB][hapmap];0.94[JPT][hapmap]
rs9465846	0.82[CHB][hapmap]
rs9465847	0.82[CHB][hapmap]
rs9465850	0.86[CHB][hapmap]

rSNP related genes

Symbol	Regulation type
E2F3	Distal transcriptional regulation
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)