SNP Report
Name | rs9368215   dbSNP |
---|---|
Location | chr:6,20637306 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1012625 | 0.89[JPT][hapmap] |
rs13220352 | 0.91[ASN][1000 genomes] |
rs1569660 | 1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[ASN][1000 genomes] |
rs2064320 | 0.89[JPT][hapmap] |
rs2179551 | 0.89[JPT][hapmap] |
rs2206578 | 0.84[CHB][hapmap];0.88[JPT][hapmap] |
rs2223622 | 0.89[JPT][hapmap] |
rs2328530 | 0.92[CHB][hapmap];0.83[ASN][1000 genomes] |
rs2328532 | 0.81[ASN][1000 genomes] |
rs2328546 | 0.92[CHB][hapmap];0.80[ASN][1000 genomes] |
rs4429936 | 0.85[CHB][hapmap];0.84[JPT][hapmap] |
rs4710937 | 0.92[ASN][1000 genomes] |
rs4712512 | 0.89[JPT][hapmap] |
rs4712518 | 0.89[JPT][hapmap] |
rs4712520 | 0.92[CHB][hapmap];0.87[CHD][hapmap];0.83[ASN][1000 genomes] |
rs4712527 | 0.85[CHB][hapmap];0.87[CHD][hapmap];0.82[ASN][1000 genomes] |
rs4991654 | 0.89[JPT][hapmap] |
rs6456359 | 0.89[JPT][hapmap];0.81[ASN][1000 genomes] |
rs6902661 | 0.89[JPT][hapmap] |
rs6907459 | 0.82[JPT][hapmap] |
rs6909467 | 0.89[JPT][hapmap] |
rs6918457 | 0.89[JPT][hapmap] |
rs6921014 | 0.92[CHB][hapmap];0.94[ASN][1000 genomes] |
rs6928198 | 0.89[JPT][hapmap] |
rs6937578 | 0.81[ASN][1000 genomes] |
rs7739974 | 0.92[CHB][hapmap];0.84[ASN][1000 genomes] |
rs7758129 | 0.86[CHB][hapmap];0.89[JPT][hapmap] |
rs7760894 | 0.89[JPT][hapmap] |
rs7763304 | 0.92[CHB][hapmap];0.95[CHD][hapmap];0.89[JPT][hapmap];0.92[ASN][1000 genomes] |
rs7771213 | 0.92[CHB][hapmap];0.89[JPT][hapmap];0.92[ASN][1000 genomes] |
rs9350263 | 0.81[JPT][hapmap] |
rs9358352 | 0.81[ASN][1000 genomes] |
rs9368214 | 0.89[JPT][hapmap];0.81[ASN][1000 genomes] |
rs9465831 | 0.89[JPT][hapmap] |
rs9465838 | 0.92[ASN][1000 genomes] |
rs978987 | 0.83[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
CDKAL1 | RNA binding protein mediated regulation |
Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL related gene | Source |
---|---|
C3orf23 | SCAN |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014