SNP Report
Basic Infomation
| Name | rs4710937 dbSNP |
|---|---|
| Location | chr:6,20630342 |
| Allele | T/C |
LD-proxy of rSNPs(r2>0.8) (count: 34)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs13220352 | 1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
| rs1569660 | 0.96[ASN][1000 genomes] |
| rs1997778 | 0.83[ASN][1000 genomes] |
| rs2223622 | 0.83[ASN][1000 genomes] |
| rs2328530 | 0.83[AFR][1000 genomes];0.89[ASN][1000 genomes] |
| rs2328532 | 0.89[ASN][1000 genomes] |
| rs2328546 | 0.88[ASN][1000 genomes] |
| rs4336434 | 0.81[ASN][1000 genomes] |
| rs4357125 | 0.81[ASN][1000 genomes] |
| rs4710935 | 0.83[ASN][1000 genomes] |
| rs4712512 | 0.82[ASN][1000 genomes] |
| rs4712513 | 0.82[ASN][1000 genomes] |
| rs4712517 | 0.83[ASN][1000 genomes] |
| rs4712518 | 0.83[ASN][1000 genomes] |
| rs4712520 | 0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[ASN][1000 genomes] |
| rs4712527 | 0.90[ASN][1000 genomes] |
| rs4991654 | 0.83[ASN][1000 genomes] |
| rs6456359 | 0.86[ASN][1000 genomes] |
| rs6902661 | 0.83[ASN][1000 genomes] |
| rs6921014 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs6928198 | 0.81[ASN][1000 genomes] |
| rs6936705 | 0.81[ASN][1000 genomes] |
| rs6937578 | 0.86[ASN][1000 genomes] |
| rs7739974 | 0.88[ASN][1000 genomes] |
| rs7760894 | 0.83[ASN][1000 genomes] |
| rs7763304 | 0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7771213 | 0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs9350263 | 0.83[ASN][1000 genomes] |
| rs9358352 | 0.86[ASN][1000 genomes] |
| rs9368214 | 0.86[ASN][1000 genomes] |
| rs9368215 | 0.92[ASN][1000 genomes] |
| rs9465831 | 0.84[ASN][1000 genomes] |
| rs9465838 | 0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs978987 | 0.84[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| CDKAL1 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014