SNP Report

Basic Infomation

Name	rs7932927 dbSNP
Location	chr:11,61958022
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 36)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10897219	0.83[EUR][1000 genomes]
rs10897237	0.80[CEU][hapmap];0.93[CHB][hapmap];0.87[JPT][hapmap];0.84[EUR][1000 genomes]
rs11230925	0.83[EUR][1000 genomes]
rs11230927	0.83[EUR][1000 genomes]
rs11230928	0.80[CEU][hapmap];0.83[EUR][1000 genomes]
rs11230929	0.83[EUR][1000 genomes]
rs11230931	0.83[EUR][1000 genomes]
rs11230935	0.83[EUR][1000 genomes]
rs11230939	0.84[EUR][1000 genomes]
rs11230972	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11494173	0.83[EUR][1000 genomes]
rs11494174	0.83[EUR][1000 genomes]
rs11603737	0.80[CEU][hapmap];0.82[EUR][1000 genomes]
rs12800538	0.93[CHB][hapmap]
rs1675088	0.80[CEU][hapmap];0.86[EUR][1000 genomes]
rs1675108	0.80[CEU][hapmap];0.84[EUR][1000 genomes]
rs1675109	0.84[EUR][1000 genomes]
rs1729377	0.80[CEU][hapmap];0.93[CHB][hapmap];0.86[JPT][hapmap];0.84[EUR][1000 genomes]
rs1792879	0.84[EUR][1000 genomes]
rs1792902	0.80[CEU][hapmap];0.93[CHB][hapmap];0.80[CHD][hapmap];0.87[JPT][hapmap];0.84[TSI][hapmap];0.84[EUR][1000 genomes]
rs1792930	0.83[EUR][1000 genomes]
rs2232931	0.93[CHB][hapmap];0.81[JPT][hapmap]
rs2232935	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2232941	0.86[CHB][hapmap];0.86[CHD][hapmap];0.87[JPT][hapmap];0.92[ASN][1000 genomes]
rs2511347	0.84[EUR][1000 genomes]
rs3781965	0.86[CHB][hapmap];0.81[JPT][hapmap]
rs3781966	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.94[TSI][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3845255	0.83[EUR][1000 genomes]
rs3900954	0.80[CEU][hapmap];0.93[CHB][hapmap];0.80[CHD][hapmap];0.87[JPT][hapmap];0.84[TSI][hapmap];0.83[EUR][1000 genomes]
rs4963483	0.85[CHB][hapmap];0.80[JPT][hapmap]
rs7113156	0.84[EUR][1000 genomes]
rs7129085	0.80[CEU][hapmap];0.81[EUR][1000 genomes]
rs7928360	0.83[EUR][1000 genomes]
rs7938597	0.93[CHB][hapmap];0.93[JPT][hapmap];0.90[ASN][1000 genomes]
rs7946207	0.82[EUR][1000 genomes]
rs7951859	0.86[CHB][hapmap];0.86[CHD][hapmap];0.87[JPT][hapmap];0.92[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
SCGB1D1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)