SNP Report
Name | rs1675088   dbSNP |
---|---|
Location | chr:11,61935741 |
Allele | G/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10897219 | 0.96[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs11230925 | 0.96[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs11230927 | 0.96[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs11230928 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs11230929 | 0.95[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs11230931 | 0.95[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs11230935 | 0.96[CEU][hapmap];0.82[CHB][hapmap];0.91[JPT][hapmap];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs11230939 | 0.97[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs11230972 | 0.83[EUR][1000 genomes] |
rs11494173 | 0.96[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs11494174 | 0.96[EUR][1000 genomes] |
rs11603737 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs1675061 | 1.00[CHB][hapmap];0.91[JPT][hapmap] |
rs1675062 | 1.00[CHB][hapmap];0.91[JPT][hapmap] |
rs1675063 | 0.85[CHB][hapmap];0.91[JPT][hapmap] |
rs1675108 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs1675109 | 0.96[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs1675131 | 1.00[CHB][hapmap];0.91[JPT][hapmap] |
rs1675133 | 0.85[CHB][hapmap];0.91[JPT][hapmap] |
rs1792879 | 0.96[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs1792930 | 0.96[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs1792936 | 0.91[JPT][hapmap] |
rs1792942 | 0.92[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.84[EUR][1000 genomes] |
rs1792943 | 0.82[CHB][hapmap];0.84[EUR][1000 genomes] |
rs1792944 | 1.00[CHB][hapmap];0.91[JPT][hapmap] |
rs1792946 | 1.00[CHB][hapmap];0.91[JPT][hapmap] |
rs1792948 | 1.00[CHB][hapmap] |
rs2232935 | 0.87[EUR][1000 genomes] |
rs2250661 | 0.84[EUR][1000 genomes] |
rs2511347 | 1.00[CEU][hapmap];0.85[CHB][hapmap];0.91[JPT][hapmap];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs3781966 | 0.84[CEU][hapmap];0.86[EUR][1000 genomes] |
rs3845255 | 0.96[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs3890102 | 0.82[CHB][hapmap] |
rs4963471 | 0.82[CHB][hapmap] |
rs7113156 | 0.96[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs7129085 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs7924786 | 0.82[CHB][hapmap] |
rs7928360 | 1.00[CEU][hapmap];0.85[CHB][hapmap];0.91[JPT][hapmap];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs7932927 | 0.80[CEU][hapmap];0.86[EUR][1000 genomes] |
rs7946207 | 0.95[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs922138 | 0.85[CHB][hapmap];0.91[JPT][hapmap] |
Symbol | Regulation type |
---|---|
ENSG00000236607 | Proximal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014