SNP Report

Basic Infomation

Name	rs7307566 dbSNP
Location	chr:12,48604682
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 45)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10875743	1.00[CHB][hapmap]
rs10875749	1.00[CHB][hapmap]
rs10875753	1.00[CHB][hapmap]
rs10875763	0.83[ASN][1000 genomes]
rs1107654	1.00[CHB][hapmap];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11168408	1.00[CHB][hapmap]
rs11168428	1.00[CHB][hapmap]
rs11168437	1.00[CHB][hapmap]
rs11168441	1.00[CHB][hapmap];0.89[YRI][hapmap]
rs11168460	1.00[CHB][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11168464	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12228750	1.00[CHB][hapmap]
rs12368659	1.00[CHB][hapmap];0.89[YRI][hapmap]
rs12816820	1.00[CHB][hapmap];0.80[YRI][hapmap]
rs12829841	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1476607	1.00[CHB][hapmap]
rs2054905	1.00[CHB][hapmap];0.80[YRI][hapmap];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2409003	0.83[EUR][1000 genomes]
rs2409004	0.83[EUR][1000 genomes]
rs2450994	0.83[EUR][1000 genomes]
rs2634681	0.80[EUR][1000 genomes]
rs2634682	0.80[EUR][1000 genomes]
rs2634684	0.81[EUR][1000 genomes]
rs2634686	0.83[EUR][1000 genomes]
rs2634688	0.82[EUR][1000 genomes]
rs2634689	0.82[EUR][1000 genomes]
rs2732441	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2732453	0.83[EUR][1000 genomes]
rs2732454	0.83[EUR][1000 genomes]
rs2732461	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2732462	0.88[EUR][1000 genomes]
rs2732466	0.81[EUR][1000 genomes]
rs4760612	1.00[CHB][hapmap]
rs4760679	1.00[CHB][hapmap]
rs7139330	1.00[CHB][hapmap]
rs7297824	1.00[CHB][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7301003	1.00[CHB][hapmap]
rs7315820	1.00[CHB][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7486941	1.00[CHB][hapmap];0.83[ASN][1000 genomes]
rs7487682	1.00[CHB][hapmap];0.88[YRI][hapmap]
rs7959684	1.00[CHB][hapmap]
rs7975632	1.00[CHB][hapmap]
rs8716	1.00[CHB][hapmap]
rs923397	0.83[EUR][1000 genomes]
rs973398	1.00[CHB][hapmap]

rSNP related genes

Symbol	Regulation type
ENSG00000269514	Distal transcriptional regulation
OR10AD1	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)