SNP Report

Basic Infomation

Name	rs12829841 dbSNP
Location	chr:12,48628739
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 34)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1061986	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10875763	0.83[ASN][1000 genomes]
rs1107654	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11168460	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11168464	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2054905	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2409003	0.87[EUR][1000 genomes]
rs2409004	0.87[EUR][1000 genomes]
rs2450994	0.87[EUR][1000 genomes]
rs2634676	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2634678	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2634680	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2634681	0.84[EUR][1000 genomes]
rs2634682	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2634684	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2634686	0.87[EUR][1000 genomes]
rs2634688	0.85[EUR][1000 genomes]
rs2634689	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2732441	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2732448	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2732453	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2732454	0.87[EUR][1000 genomes]
rs2732461	0.90[EUR][1000 genomes]
rs2732462	0.92[EUR][1000 genomes]
rs2732466	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2732479	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2732481	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2732484	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2732486	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7297824	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7307566	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7315820	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7486941	0.83[ASN][1000 genomes]
rs923397	0.87[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000269514	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)