SNP Report

Basic Infomation

Name	rs72832380 dbSNP
Location	chr:6,20844693
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 63)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11967047	0.98[ASN][1000 genomes]
rs11967068	0.98[ASN][1000 genomes]
rs12662218	0.81[EUR][1000 genomes]
rs12663147	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12664021	0.81[ASN][1000 genomes]
rs12665734	0.95[ASN][1000 genomes]
rs16884229	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16901585	0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2473651	0.83[ASN][1000 genomes]
rs2493995	0.83[ASN][1000 genomes]
rs2745930	0.83[ASN][1000 genomes]
rs2745931	0.83[ASN][1000 genomes]
rs2819994	0.83[ASN][1000 genomes]
rs2819996	0.83[ASN][1000 genomes]
rs2819998	0.81[ASN][1000 genomes]
rs2820001	0.81[ASN][1000 genomes]
rs4077403	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4493738	0.83[ASN][1000 genomes]
rs5007237	0.96[ASN][1000 genomes]
rs55738226	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs55805308	0.82[EUR][1000 genomes]
rs55987458	0.81[ASN][1000 genomes]
rs56027426	0.89[ASN][1000 genomes]
rs56080233	0.81[EUR][1000 genomes]
rs56091419	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56251119	0.81[ASN][1000 genomes]
rs56883837	0.81[EUR][1000 genomes]
rs57087943	0.81[ASN][1000 genomes]
rs59840719	0.81[ASN][1000 genomes]
rs60568948	0.97[ASN][1000 genomes]
rs60893008	0.81[ASN][1000 genomes]
rs62398106	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62398107	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62398108	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62398111	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6909558	0.81[ASN][1000 genomes]
rs6914232	0.81[EUR][1000 genomes]
rs6920045	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6941508	0.99[ASN][1000 genomes]
rs72832323	0.81[ASN][1000 genomes]
rs72832326	0.81[ASN][1000 genomes]
rs72832333	0.81[ASN][1000 genomes]
rs72832338	0.83[ASN][1000 genomes]
rs72832344	0.85[ASN][1000 genomes]
rs72832348	0.88[ASN][1000 genomes]
rs72832359	0.94[ASN][1000 genomes]
rs72832371	0.96[ASN][1000 genomes]
rs72832373	0.98[ASN][1000 genomes]
rs72832379	0.98[ASN][1000 genomes]
rs72832387	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7452218	0.81[ASN][1000 genomes]
rs7739013	0.84[EUR][1000 genomes]
rs7740094	0.82[EUR][1000 genomes]
rs7742468	0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7751431	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7753271	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7765060	0.98[ASN][1000 genomes]
rs7765765	0.81[EUR][1000 genomes]
rs9350291	0.89[ASN][1000 genomes]
rs9350292	0.89[ASN][1000 genomes]
rs9356757	0.92[ASN][1000 genomes]
rs9366363	0.94[ASN][1000 genomes]
rs9465914	0.98[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)