SNP Report

Basic Infomation

Name	rs2819994 dbSNP
Location	chr:6,20753936
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 46)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11967047	0.84[ASN][1000 genomes]
rs11967068	0.84[ASN][1000 genomes]
rs12663147	0.83[ASN][1000 genomes]
rs12664021	0.98[ASN][1000 genomes]
rs12665734	0.82[ASN][1000 genomes]
rs2473651	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2493995	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2745930	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2745931	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2819992	0.84[AFR][1000 genomes]
rs2819996	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2819998	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2820001	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4493738	0.97[ASN][1000 genomes]
rs55987458	0.98[ASN][1000 genomes]
rs56017320	0.87[ASN][1000 genomes]
rs56251119	0.99[ASN][1000 genomes]
rs57087943	0.98[ASN][1000 genomes]
rs59840719	0.98[ASN][1000 genomes]
rs60568948	0.83[ASN][1000 genomes]
rs60893008	0.98[ASN][1000 genomes]
rs6909558	0.98[ASN][1000 genomes]
rs6920045	0.81[ASN][1000 genomes]
rs6941508	0.82[ASN][1000 genomes]
rs72832313	0.88[ASN][1000 genomes]
rs72832315	0.87[ASN][1000 genomes]
rs72832323	0.98[ASN][1000 genomes]
rs72832325	0.97[ASN][1000 genomes]
rs72832326	0.98[ASN][1000 genomes]
rs72832333	0.98[ASN][1000 genomes]
rs72832335	0.96[ASN][1000 genomes]
rs72832338	0.97[ASN][1000 genomes]
rs72832344	0.94[ASN][1000 genomes]
rs72832348	0.89[ASN][1000 genomes]
rs72832359	0.84[ASN][1000 genomes]
rs72832371	0.83[ASN][1000 genomes]
rs72832373	0.85[ASN][1000 genomes]
rs72832379	0.84[ASN][1000 genomes]
rs72832380	0.83[ASN][1000 genomes]
rs7452218	0.98[ASN][1000 genomes]
rs7742468	0.81[ASN][1000 genomes]
rs7751431	0.80[ASN][1000 genomes]
rs7753271	0.81[ASN][1000 genomes]
rs7765060	0.84[ASN][1000 genomes]
rs9465914	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9688471	0.83[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)