SNP Report
Basic Infomation
| Name | rs9688471 dbSNP |
|---|---|
| Location | chr:6,20736817 |
| Allele | C/T |
LD-proxy of rSNPs(r2>0.8) (count: 29)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs12664021 | 0.81[ASN][1000 genomes] |
| rs2473651 | 0.83[ASN][1000 genomes] |
| rs2493995 | 0.81[ASN][1000 genomes] |
| rs2745930 | 0.83[ASN][1000 genomes] |
| rs2745931 | 0.83[ASN][1000 genomes] |
| rs2819994 | 0.83[ASN][1000 genomes] |
| rs2819996 | 0.83[ASN][1000 genomes] |
| rs2819998 | 0.82[ASN][1000 genomes] |
| rs2820001 | 0.82[ASN][1000 genomes] |
| rs4493738 | 0.81[ASN][1000 genomes] |
| rs55987458 | 0.82[ASN][1000 genomes] |
| rs56017320 | 1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes] |
| rs56251119 | 0.82[ASN][1000 genomes] |
| rs57087943 | 0.82[ASN][1000 genomes] |
| rs59840719 | 0.82[ASN][1000 genomes] |
| rs60893008 | 0.82[ASN][1000 genomes] |
| rs6909558 | 0.82[ASN][1000 genomes] |
| rs72832308 | 0.84[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs72832309 | 0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes] |
| rs72832313 | 0.93[EUR][1000 genomes];0.94[ASN][1000 genomes] |
| rs72832315 | 0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes] |
| rs72832323 | 0.82[ASN][1000 genomes] |
| rs72832325 | 0.81[ASN][1000 genomes] |
| rs72832326 | 0.82[ASN][1000 genomes] |
| rs72832333 | 0.82[ASN][1000 genomes] |
| rs72832335 | 0.80[ASN][1000 genomes] |
| rs72832338 | 0.81[ASN][1000 genomes] |
| rs7452218 | 0.82[ASN][1000 genomes] |
| rs7741604 | 0.81[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| CDKAL1 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014