SNP Report

Basic Infomation

Name	rs72832379 dbSNP
Location	chr:6,20844236
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 58)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11967047	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11967068	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12663147	0.98[ASN][1000 genomes]
rs12664021	0.82[ASN][1000 genomes]
rs12665734	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16884229	0.94[ASN][1000 genomes]
rs16901585	0.93[ASN][1000 genomes]
rs2473651	0.84[ASN][1000 genomes]
rs2493995	0.84[ASN][1000 genomes]
rs2745930	0.84[ASN][1000 genomes]
rs2745931	0.84[ASN][1000 genomes]
rs2819994	0.84[ASN][1000 genomes]
rs2819996	0.84[ASN][1000 genomes]
rs2819998	0.83[ASN][1000 genomes]
rs2820001	0.83[ASN][1000 genomes]
rs4077403	0.91[ASN][1000 genomes]
rs4493738	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs5007237	0.94[ASN][1000 genomes]
rs55738226	0.94[ASN][1000 genomes]
rs55987458	0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs56027426	0.88[ASN][1000 genomes]
rs56091419	0.94[ASN][1000 genomes]
rs56251119	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs57087943	0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs59840719	0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs60568948	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs60893008	0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs62398106	0.91[ASN][1000 genomes]
rs62398107	0.91[ASN][1000 genomes]
rs62398108	0.90[ASN][1000 genomes]
rs62398111	0.87[ASN][1000 genomes]
rs6909558	0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6920045	0.97[ASN][1000 genomes]
rs6941508	0.98[ASN][1000 genomes]
rs72832323	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72832325	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72832326	0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72832333	0.83[ASN][1000 genomes]
rs72832335	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72832338	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72832344	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72832348	0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72832359	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72832371	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72832373	0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72832380	0.98[ASN][1000 genomes]
rs72832387	0.94[ASN][1000 genomes]
rs72834308	0.82[EUR][1000 genomes]
rs7452218	0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7742468	0.95[ASN][1000 genomes]
rs7751431	0.96[ASN][1000 genomes]
rs7753271	0.95[ASN][1000 genomes]
rs7765060	1.00[ASN][1000 genomes]
rs9350291	0.88[ASN][1000 genomes]
rs9350292	0.88[ASN][1000 genomes]
rs9356757	0.90[ASN][1000 genomes]
rs9366363	0.93[ASN][1000 genomes]
rs9465914	0.99[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)