SNP Report
Basic Infomation
| Name | rs9350291 dbSNP |
|---|---|
| Location | chr:6,20860842 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 32)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11967047 | 0.88[ASN][1000 genomes] |
| rs11967068 | 0.88[ASN][1000 genomes] |
| rs12663147 | 0.89[ASN][1000 genomes] |
| rs12665734 | 0.84[ASN][1000 genomes] |
| rs16884229 | 0.93[ASN][1000 genomes] |
| rs16901585 | 0.92[ASN][1000 genomes] |
| rs4077403 | 0.91[ASN][1000 genomes] |
| rs5007237 | 0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes] |
| rs55738226 | 0.93[ASN][1000 genomes] |
| rs56027426 | 0.87[ASN][1000 genomes] |
| rs56091419 | 0.93[ASN][1000 genomes] |
| rs60568948 | 0.86[ASN][1000 genomes] |
| rs62398106 | 0.91[ASN][1000 genomes] |
| rs62398107 | 0.91[ASN][1000 genomes] |
| rs62398108 | 0.89[ASN][1000 genomes] |
| rs62398111 | 0.86[ASN][1000 genomes] |
| rs6920045 | 0.88[ASN][1000 genomes] |
| rs6941508 | 0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes] |
| rs72832359 | 0.84[ASN][1000 genomes] |
| rs72832371 | 0.85[ASN][1000 genomes] |
| rs72832373 | 0.87[ASN][1000 genomes] |
| rs72832379 | 0.88[ASN][1000 genomes] |
| rs72832380 | 0.89[ASN][1000 genomes] |
| rs72832387 | 0.93[ASN][1000 genomes] |
| rs7742468 | 0.86[ASN][1000 genomes] |
| rs7751431 | 0.86[ASN][1000 genomes] |
| rs7753271 | 0.86[ASN][1000 genomes] |
| rs7765060 | 0.88[ASN][1000 genomes] |
| rs9350292 | 0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs9356757 | 0.87[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs9366363 | 0.81[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs9465914 | 0.87[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| CDKAL1 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014