SNP Report

Basic Infomation

Name	rs67602696 dbSNP
Location	chr:1,201012937
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 43)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10494828	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10800755	1.00[ASN][1000 genomes]
rs10800756	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11576681	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11580823	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11583328	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11583546	1.00[ASN][1000 genomes]
rs11584383	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11586763	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11589573	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12118735	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12122721	0.91[EUR][1000 genomes]
rs12122809	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12126806	0.89[EUR][1000 genomes]
rs12131796	1.00[ASN][1000 genomes]
rs12132298	1.00[ASN][1000 genomes]
rs12132349	1.00[ASN][1000 genomes]
rs12140420	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12142704	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17419032	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2297909	0.81[EUR][1000 genomes]
rs3208703	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34873729	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35730213	1.00[ASN][1000 genomes]
rs3767498	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3767501	1.00[ASN][1000 genomes]
rs3767502	1.00[ASN][1000 genomes]
rs3861928	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3913893	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41299637	1.00[ASN][1000 genomes]
rs4915473	1.00[ASN][1000 genomes]
rs5010839	0.86[EUR][1000 genomes]
rs55734382	0.83[AFR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55757739	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55838263	1.00[ASN][1000 genomes]
rs55862304	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59655222	1.00[ASN][1000 genomes]
rs6702590	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72749166	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7522462	1.00[ASN][1000 genomes]
rs7535723	0.81[EUR][1000 genomes]
rs7539693	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7554511	1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CACNA1S	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)