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rVarBase
SNP Report
Basic Infomation
Name
rs5010839  
dbSNP
Location
chr:1,201012044
Allele
A/T
LD-proxy of rSNPs(r
2
>0.8) (count: 12)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10920097
0.81[ASN][1000 genomes]
rs11576681
0.84[EUR][1000 genomes]
rs11580823
0.80[EUR][1000 genomes]
rs11583328
0.84[EUR][1000 genomes]
rs12082403
0.98[ASN][1000 genomes]
rs12122809
0.86[EUR][1000 genomes]
rs12566395
0.98[ASN][1000 genomes]
rs17419032
0.80[EUR][1000 genomes]
rs55801618
0.81[ASN][1000 genomes]
rs55837027
0.98[ASN][1000 genomes]
rs67602696
0.86[EUR][1000 genomes]
rs72749166
0.81[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
ENSG00000234132
RNA binding protein mediated regulation
CACNA1S
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)