SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10920097	0.83[ASN][1000 genomes]
rs12065493	0.95[AFR][1000 genomes]
rs12081096	0.92[CHB][hapmap];0.83[JPT][hapmap];0.82[ASN][1000 genomes]
rs12566395	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16847632	1.00[CEU][hapmap]
rs2279943	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2297899	1.00[CEU][hapmap]
rs34754698	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs3820421	1.00[CEU][hapmap]
rs5010839	0.98[ASN][1000 genomes]
rs55801618	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs55837027	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56183942	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000234132	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)