SNP Report

Basic Infomation

Name	rs2279943 dbSNP
Location	chr:1,201012042
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 17)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10494828	0.85[CEU][hapmap]
rs11576681	0.85[CEU][hapmap]
rs11583328	0.92[CEU][hapmap]
rs11584383	0.85[CEU][hapmap]
rs12081096	0.92[CHB][hapmap];0.83[JPT][hapmap]
rs12082403	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12122721	0.85[CEU][hapmap]
rs12122809	0.88[CEU][hapmap]
rs12126806	0.85[CEU][hapmap]
rs12566395	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1507147	0.81[CEU][hapmap]
rs1546416	0.85[CEU][hapmap]
rs17419032	0.88[CEU][hapmap]
rs2297909	0.88[CEU][hapmap]
rs3208703	0.89[CEU][hapmap]
rs7522462	0.81[CEU][hapmap]
rs7554511	0.81[CEU][hapmap]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)