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rVarBase
SNP Report
Basic Infomation
Name
rs1507147  
dbSNP
Location
chr:1,201011824
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 5)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10920091
0.83[EUR][1000 genomes]
rs12065493
0.87[ASN][1000 genomes]
rs1546416
0.96[CEU][hapmap];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2221581
0.83[EUR][1000 genomes]
rs2279943
0.81[CEU][hapmap]
rSNP related genes
Symbol
Regulation type
ENSG00000234132
RNA binding protein mediated regulation
CACNA1S
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)