SNP Report

Basic Infomation

Name	rs6120950 dbSNP
Location	chr:20,30225070
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 68)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1923026	0.81[AMR][1000 genomes]
rs2016742	0.81[AMR][1000 genomes]
rs2376864	0.81[AMR][1000 genomes]
rs2811	0.81[AMR][1000 genomes]
rs45557936	0.91[EUR][1000 genomes]
rs58757492	0.81[AMR][1000 genomes]
rs6058110	0.81[AMR][1000 genomes]
rs6058122	0.81[AMR][1000 genomes]
rs6058151	0.81[AMR][1000 genomes]
rs6058152	0.81[AMR][1000 genomes]
rs6058171	0.81[AMR][1000 genomes]
rs6058187	0.81[AMR][1000 genomes]
rs6058196	0.81[AMR][1000 genomes]
rs6058197	0.81[AMR][1000 genomes]
rs6059889	0.81[AMR][1000 genomes]
rs6059899	0.81[AMR][1000 genomes]
rs6059979	0.81[AMR][1000 genomes]
rs6060116	0.82[AMR][1000 genomes]
rs6060134	0.81[AMR][1000 genomes]
rs6060171	0.81[AMR][1000 genomes]
rs6060174	0.81[AMR][1000 genomes]
rs6060195	0.81[AMR][1000 genomes]
rs6060198	0.81[AMR][1000 genomes]
rs6060210	0.81[AMR][1000 genomes]
rs6060211	0.81[AMR][1000 genomes]
rs6060249	0.81[AMR][1000 genomes]
rs6060260	0.81[AMR][1000 genomes]
rs6060261	0.81[AMR][1000 genomes]
rs6060263	0.81[AMR][1000 genomes]
rs6060286	0.81[AMR][1000 genomes]
rs6060289	0.81[AMR][1000 genomes]
rs6060291	0.81[AMR][1000 genomes]
rs6060295	0.81[AMR][1000 genomes]
rs6060297	0.81[AMR][1000 genomes]
rs6060323	0.81[AMR][1000 genomes]
rs6060344	0.81[AMR][1000 genomes]
rs6060399	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs6060409	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs6060425	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6060446	0.91[EUR][1000 genomes]
rs6087710	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs6087711	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6087716	0.91[EUR][1000 genomes]
rs6088736	0.81[AMR][1000 genomes]
rs6088853	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6088854	0.90[EUR][1000 genomes]
rs6088855	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6088856	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6088857	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6088858	0.91[EUR][1000 genomes]
rs6088864	0.90[EUR][1000 genomes]
rs6119575	0.81[AMR][1000 genomes]
rs6119610	0.87[AFR][1000 genomes]
rs6120815	0.81[AMR][1000 genomes]
rs6120832	0.81[AMR][1000 genomes]
rs6120835	0.81[AMR][1000 genomes]
rs6120858	0.81[AMR][1000 genomes]
rs6120862	0.81[AMR][1000 genomes]
rs6120879	0.84[AMR][1000 genomes]
rs6120937	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs6120970	0.87[EUR][1000 genomes]
rs6579238	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs6579239	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs7266471	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs7269866	0.92[EUR][1000 genomes]
rs7362275	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs750144	0.81[AMR][1000 genomes]
rs8126422	0.81[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
COX4I2	Proximal transcriptional regulation
BCL2L1	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)