SNP Report
Name | rs6088855   dbSNP |
---|---|
Location | chr:20,30225792 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs45557936 | 0.82[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs56090668 | 0.82[AMR][1000 genomes] |
rs6060116 | 0.80[AMR][1000 genomes] |
rs6060399 | 0.82[AFR][1000 genomes];0.84[AMR][1000 genomes] |
rs6060409 | 0.82[AFR][1000 genomes];0.84[AMR][1000 genomes] |
rs6060425 | 0.84[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs6060446 | 0.96[EUR][1000 genomes] |
rs6087710 | 0.85[AMR][1000 genomes] |
rs6087711 | 0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs6087716 | 0.82[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs6088853 | 0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs6088854 | 0.92[EUR][1000 genomes] |
rs6088856 | 0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs6088857 | 0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs6088858 | 0.82[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs6088864 | 0.82[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs6119610 | 0.90[AFR][1000 genomes] |
rs6120879 | 0.82[AMR][1000 genomes] |
rs6120937 | 0.82[AFR][1000 genomes];0.84[AMR][1000 genomes] |
rs6120950 | 0.91[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs6120970 | 0.91[EUR][1000 genomes] |
rs6579238 | 0.85[AMR][1000 genomes] |
rs6579239 | 0.85[AMR][1000 genomes] |
rs7266471 | 0.80[AFR][1000 genomes];0.84[AMR][1000 genomes] |
rs7269866 | 0.82[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs7362275 | 0.82[AFR][1000 genomes];0.84[AMR][1000 genomes] |
Symbol | Regulation type |
---|---|
COX4I2 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014