SNP Report

Basic Infomation

Name	rs579669 dbSNP
Location	chr:11,63780468
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 46)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10897465	0.85[EUR][1000 genomes]
rs10897467	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10897469	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10897470	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11231643	0.82[EUR][1000 genomes]
rs11231655	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11231662	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11231663	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11231664	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11231670	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11231671	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11600062	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11601228	0.81[EUR][1000 genomes]
rs11605797	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12417157	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12417507	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12421757	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12790749	0.80[EUR][1000 genomes]
rs12797540	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12800703	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12808604	0.81[EUR][1000 genomes]
rs2129467	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34134698	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs34595065	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs35492216	0.83[EUR][1000 genomes]
rs3740637	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs479975	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs492357	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4980499	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4980500	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4980501	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4980517	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs500493	0.82[EUR][1000 genomes]
rs501278	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs504060	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs509701	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs523586	0.81[EUR][1000 genomes]
rs528927	0.82[EUR][1000 genomes]
rs539432	0.82[EUR][1000 genomes]
rs553724	0.80[EUR][1000 genomes]
rs562865	0.81[EUR][1000 genomes]
rs581355	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs67136175	0.95[EUR][1000 genomes]
rs7112348	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7926608	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7936614	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
MACROD1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)