SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11264341	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12411216	0.81[ASN][1000 genomes]
rs2070803	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2075571	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2974937	0.81[ASN][1000 genomes]
rs3814316	0.93[ASN][1000 genomes]
rs423144	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4971059	0.91[ASN][1000 genomes]
rs4971093	0.90[ASN][1000 genomes]
rs4971099	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4971100	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7366775	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9426886	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ADAM15	Distal transcriptional regulation
EFNA1	Distal transcriptional regulation
KRTCAP2	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)