SNP Report

Basic Infomation

Name	rs4971078 dbSNP
Location	chr:1,155129023
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 42)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10157801	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10908458	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11264333	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11264334	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11264335	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11264337	0.82[ASN][1000 genomes]
rs11264338	0.82[ASN][1000 genomes]
rs11264339	0.82[ASN][1000 genomes]
rs12028043	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12124306	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12127609	0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12129003	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12752585	0.82[ASN][1000 genomes]
rs12904	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34257409	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3814316	0.85[AMR][1000 genomes]
rs4246529	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4276913	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4276914	0.82[ASN][1000 genomes]
rs4390169	0.94[ASN][1000 genomes]
rs4421576	0.82[ASN][1000 genomes]
rs4460629	0.82[ASN][1000 genomes]
rs4644481	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4745	0.94[ASN][1000 genomes]
rs4971052	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4971054	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4971059	0.90[AMR][1000 genomes]
rs4971066	0.80[ASN][1000 genomes]
rs4971073	0.80[ASN][1000 genomes]
rs4971076	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4971077	1.00[ASN][1000 genomes]
rs4971079	1.00[ASN][1000 genomes]
rs4971085	0.82[ASN][1000 genomes]
rs4971088	0.82[ASN][1000 genomes]
rs4971091	0.87[AMR][1000 genomes]
rs4971093	0.94[AMR][1000 genomes]
rs6668815	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6676150	0.94[ASN][1000 genomes]
rs7364524	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7535292	1.00[ASN][1000 genomes]
rs7556304	0.82[ASN][1000 genomes]
rs9297	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)