SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 23)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10157801	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10908458	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11264333	0.83[EUR][1000 genomes]
rs11264334	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11264335	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12028043	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12124306	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12127609	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12129003	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12904	0.82[EUR][1000 genomes]
rs34257409	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4246529	0.85[EUR][1000 genomes]
rs4276913	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4644481	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4971052	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4971059	0.82[AMR][1000 genomes]
rs4971076	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4971078	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4971091	0.91[AMR][1000 genomes]
rs4971093	0.85[AMR][1000 genomes]
rs6668815	0.85[AMR][1000 genomes]
rs7364524	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs9297	0.82[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
DPM3	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)