SNP Report

Basic Infomation

Name	rs38916 dbSNP
Location	chr:7,116900032
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 40)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10226248	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10226864	0.95[ASN][1000 genomes]
rs10235236	0.95[ASN][1000 genomes]
rs10255896	0.95[ASN][1000 genomes]
rs10256129	0.95[ASN][1000 genomes]
rs10271623	0.95[ASN][1000 genomes]
rs10280067	0.95[ASN][1000 genomes]
rs11981089	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12706145	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12706147	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs13224335	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13227482	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs13246951	0.84[ASN][1000 genomes]
rs1468655	0.95[ASN][1000 genomes]
rs1860698	0.95[ASN][1000 genomes]
rs2402176	0.88[ASN][1000 genomes]
rs34911130	0.98[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs38909	0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4727845	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4730773	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4730775	0.85[EUR][1000 genomes]
rs6466605	0.95[ASN][1000 genomes]
rs6466606	0.95[ASN][1000 genomes]
rs6466607	0.95[ASN][1000 genomes]
rs6942558	0.95[ASN][1000 genomes]
rs6944152	0.84[ASN][1000 genomes]
rs6947786	0.95[ASN][1000 genomes]
rs6950776	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6951125	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6958283	0.94[ASN][1000 genomes]
rs6965467	0.84[ASN][1000 genomes]
rs6968768	0.95[ASN][1000 genomes]
rs6974937	0.95[ASN][1000 genomes]
rs6975501	0.95[ASN][1000 genomes]
rs718738	0.92[ASN][1000 genomes]
rs7776963	0.95[ASN][1000 genomes]
rs7795841	0.84[ASN][1000 genomes]
rs7802930	0.92[ASN][1000 genomes]
rs9691008	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9692365	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
MTND4P6	Proximal transcriptional regulation
TES	Distal transcriptional regulation
ST7	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)