SNP Report
Name | rs34911130   dbSNP |
---|---|
Location | chr:7,116907379 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10226248 | 0.92[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs11981089 | 0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs12706145 | 0.94[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs12706147 | 0.93[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs13224335 | 0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs13227482 | 0.84[AMR][1000 genomes];0.92[EUR][1000 genomes] |
rs38909 | 0.96[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs38916 | 0.98[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs4727845 | 0.84[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs4730773 | 0.86[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs4730775 | 0.82[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs6946781 | 0.97[ASN][1000 genomes] |
rs6950776 | 0.84[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs6951125 | 0.84[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs6979800 | 0.98[ASN][1000 genomes] |
rs9691008 | 0.94[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs9692365 | 0.94[AMR][1000 genomes];0.94[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000230605 | Proximal transcriptional regulation |
ENSG00000230785 | Proximal transcriptional regulation |
TES | Distal transcriptional regulation |
ST7 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014