SNP Report
Name | rs6975501   dbSNP |
---|---|
Location | chr:7,116900643 |
Allele | G/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10226864 | 0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs10235236 | 0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs10255896 | 0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs10256129 | 0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs10271623 | 0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs10280067 | 0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs11981089 | 0.97[ASN][1000 genomes] |
rs13224335 | 0.97[ASN][1000 genomes] |
rs13246951 | 0.87[ASN][1000 genomes] |
rs1468655 | 0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs1860698 | 0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs2402176 | 0.91[ASN][1000 genomes] |
rs38909 | 0.97[ASN][1000 genomes] |
rs38916 | 0.95[ASN][1000 genomes] |
rs6466605 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs6466606 | 1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs6466607 | 0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs6942558 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs6944152 | 0.87[ASN][1000 genomes] |
rs6946781 | 0.89[AFR][1000 genomes];0.82[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs6947786 | 0.82[AMR][1000 genomes];0.98[ASN][1000 genomes] |
rs6958283 | 1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs6965467 | 0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs6968768 | 0.82[AMR][1000 genomes];0.98[ASN][1000 genomes] |
rs6974937 | 1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6979800 | 0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes] |
rs718738 | 0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs7776963 | 1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7795841 | 0.87[ASN][1000 genomes] |
rs7802930 | 1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
MTND4P6 | Proximal transcriptional regulation |
TES | Distal transcriptional regulation |
ST7 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014