SNP Report
Name | rs35085112   dbSNP |
---|---|
Location | chr:2,61632228 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11691734 | 0.81[AFR][1000 genomes];0.80[EUR][1000 genomes] |
rs1186697 | 0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs1186708 | 0.88[ASN][1000 genomes] |
rs1186710 | 0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs1186711 | 0.90[EUR][1000 genomes] |
rs12713436 | 0.84[EUR][1000 genomes] |
rs13003376 | 0.83[EUR][1000 genomes] |
rs13023037 | 0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs1867839 | 0.81[EUR][1000 genomes] |
rs1880866 | 0.83[EUR][1000 genomes] |
rs1900572 | 0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs2121660 | 0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs2252662 | 0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs2264100 | 0.88[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs2421192 | 0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs2421203 | 0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs2442034 | 0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs2463102 | 0.81[EUR][1000 genomes] |
rs2592352 | 0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs2593625 | 0.89[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs2593626 | 0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs2593633 | 0.82[EUR][1000 genomes] |
rs2694625 | 0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs2694635 | 0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs2694642 | 0.80[EUR][1000 genomes] |
rs2694653 | 0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs2950268 | 0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs4430924 | 0.81[EUR][1000 genomes] |
rs4672445 | 0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs6545867 | 0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs6545871 | 0.84[EUR][1000 genomes] |
rs7588814 | 0.83[AFR][1000 genomes];0.84[EUR][1000 genomes] |
rs778143 | 0.81[EUR][1000 genomes] |
rs778152 | 0.90[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs778154 | 0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs778155 | 0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
USP34 | Distal transcriptional regulation |
XPO1 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014