SNP Report

Basic Infomation

Name	rs2950268 dbSNP
Location	chr:2,61615763
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 37)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1186697	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1186708	0.88[ASN][1000 genomes]
rs1186710	0.89[EUR][1000 genomes]
rs1186711	0.89[EUR][1000 genomes]
rs12713436	0.83[EUR][1000 genomes]
rs13003376	0.82[EUR][1000 genomes]
rs13023037	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1867839	0.80[EUR][1000 genomes]
rs1880866	0.82[EUR][1000 genomes]
rs1900572	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2121660	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2252662	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2264100	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2421192	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2421203	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2442034	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2463102	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2592352	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2593625	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2593626	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2593633	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2694625	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2694635	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2694642	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2694653	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35085112	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4430924	0.80[EUR][1000 genomes]
rs4672445	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6545867	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6545871	0.83[EUR][1000 genomes]
rs7578139	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7588814	0.83[EUR][1000 genomes]
rs778143	0.82[EUR][1000 genomes]
rs778144	0.81[EUR][1000 genomes]
rs778152	0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs778154	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs778155	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
USP34	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)