SNP Report

Basic Infomation

Name	rs2904982 dbSNP
Location	chr:11,65004301
Allele	G/T/A

LD-proxy of rSNPs(r²>0.8) (count: 48)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1195733	1.00[CHB][hapmap]
rs1633466	1.00[CHB][hapmap]
rs1783486	1.00[CHB][hapmap];0.81[ASN][1000 genomes]
rs1858783	1.00[CHB][hapmap]
rs239257	0.81[ASN][1000 genomes]
rs239261	1.00[CEU][hapmap];1.00[CHB][hapmap];0.83[AFR][1000 genomes]
rs2904966	0.85[CEU][hapmap];1.00[CHB][hapmap];0.83[AMR][1000 genomes]
rs2904967	1.00[CHB][hapmap]
rs2904979	1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[ASN][1000 genomes]
rs2904980	1.00[CHB][hapmap];0.85[ASN][1000 genomes]
rs2904981	1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[ASN][1000 genomes]
rs2904983	0.85[ASN][1000 genomes]
rs2904984	1.00[CHB][hapmap];0.81[ASN][1000 genomes]
rs2957111	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3015997	1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[ASN][1000 genomes]
rs3016001	0.81[ASN][1000 genomes]
rs3741386	1.00[CHB][hapmap]
rs482842	1.00[CHB][hapmap]
rs487397	0.80[AMR][1000 genomes];0.80[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs487989	1.00[CHB][hapmap]
rs503277	1.00[CHB][hapmap]
rs506280	1.00[CHB][hapmap]
rs507005	1.00[CHB][hapmap]
rs509303	1.00[CHB][hapmap]
rs526502	1.00[CHB][hapmap]
rs542142	0.83[AMR][1000 genomes]
rs551523	1.00[CHB][hapmap]
rs554122	1.00[CHB][hapmap]
rs560097	1.00[CHB][hapmap]
rs592050	1.00[CHB][hapmap]
rs611910	1.00[CHB][hapmap]
rs612392	0.85[CEU][hapmap]
rs620427	0.85[CEU][hapmap];1.00[CHB][hapmap]
rs625427	0.85[ASN][1000 genomes]
rs626555	1.00[CHB][hapmap]
rs626802	1.00[CHB][hapmap]
rs630055	1.00[CHB][hapmap]
rs650056	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs655433	1.00[CHB][hapmap]
rs6591180	1.00[CHB][hapmap];0.82[YRI][hapmap]
rs667341	1.00[CHB][hapmap]
rs668735	1.00[CHB][hapmap]
rs673147	1.00[CHB][hapmap]
rs676114	1.00[CHB][hapmap];0.85[YRI][hapmap];0.83[AMR][1000 genomes]
rs676573	1.00[CHB][hapmap]
rs689288	0.85[CEU][hapmap]
rs7116674	1.00[CHB][hapmap];0.85[YRI][hapmap]
rs8638	1.00[CHB][hapmap]

rSNP related genes

Symbol	Regulation type
SYVN1	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)