SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12054720	1.00[CEU][hapmap]
rs26492	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs26507	0.82[CHB][hapmap];0.86[JPT][hapmap];0.82[ASN][1000 genomes]
rs27037	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs27038	0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs27041	0.95[CHB][hapmap];0.81[JPT][hapmap];0.87[ASN][1000 genomes]
rs27433	0.86[CHB][hapmap];0.81[JPT][hapmap]
rs27524	0.86[CHB][hapmap];0.86[JPT][hapmap];0.86[ASN][1000 genomes]
rs27583	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs28081	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs57889668	0.81[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CAST	RNA binding protein mediated regulation
ERAP1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)