SNP Report

Basic Infomation

Name	rs2181205 dbSNP
Location	chr:10,81704156
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 63)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10788319	0.91[CHB][hapmap];0.84[JPT][hapmap];0.88[ASN][1000 genomes]
rs10788321	0.88[ASN][1000 genomes]
rs10887199	0.90[CHB][hapmap];0.84[JPT][hapmap];0.90[ASN][1000 genomes]
rs10887215	0.85[CHB][hapmap];0.84[JPT][hapmap];0.90[ASN][1000 genomes]
rs10887218	0.91[CHB][hapmap];0.85[JPT][hapmap];0.90[ASN][1000 genomes]
rs10887226	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10887229	0.88[ASN][1000 genomes]
rs10887294	0.83[EUR][1000 genomes]
rs11200859	0.91[CHB][hapmap];0.85[JPT][hapmap];0.88[ASN][1000 genomes]
rs11200971	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11200972	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11200974	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11200977	0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11200979	1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11200980	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11200982	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11200984	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11200985	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11201000	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11201012	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11201014	0.84[ASN][1000 genomes]
rs11201025	0.84[ASN][1000 genomes]
rs12218540	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12219080	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12240866	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12243433	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12243538	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12245076	0.95[CHB][hapmap];0.85[JPT][hapmap];0.88[ASN][1000 genomes]
rs12245535	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12253608	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs12259284	0.85[YRI][hapmap];0.92[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs12261336	0.83[AMR][1000 genomes]
rs12261337	0.91[AMR][1000 genomes]
rs12264259	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12264378	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17878456	0.91[AMR][1000 genomes]
rs17884887	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1885549	0.91[CHB][hapmap];0.85[JPT][hapmap];0.90[ASN][1000 genomes]
rs1885551	0.90[CHB][hapmap];0.84[JPT][hapmap];0.90[ASN][1000 genomes]
rs1885552	0.91[CHB][hapmap];0.85[JPT][hapmap];0.90[ASN][1000 genomes]
rs1998374	0.91[CHB][hapmap];0.85[JPT][hapmap];0.90[ASN][1000 genomes]
rs2181204	0.90[CHB][hapmap];0.90[ASN][1000 genomes]
rs28715525	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3793925	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3923564	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3934643	0.84[ASN][1000 genomes]
rs4325265	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4335481	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4369337	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4379774	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4442488	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4466773	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4466774	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs59169164	0.90[ASN][1000 genomes]
rs61858841	0.88[ASN][1000 genomes]
rs61860416	0.84[ASN][1000 genomes]
rs6413523	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs723192	0.91[CHB][hapmap];0.85[JPT][hapmap];0.92[ASN][1000 genomes]
rs726014	0.90[CHB][hapmap];0.84[JPT][hapmap];0.91[ASN][1000 genomes]
rs726288	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs911886	0.95[CHB][hapmap];1.00[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs958865	0.95[CHB][hapmap];0.85[JPT][hapmap];0.92[ASN][1000 genomes]
rs9651447	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
MBL1P	RNA binding protein mediated regulation
SFTPD	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)