SNP Report

Basic Infomation

Name	rs11201014 dbSNP
Location	chr:10,81740142
Allele	T/G

LD-proxy of rSNPs(r²>0.8) (count: 63)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10788319	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10788321	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10887199	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10887215	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10887218	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10887226	0.86[ASN][1000 genomes]
rs10887229	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10887297	0.83[ASN][1000 genomes]
rs11200859	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11200971	0.92[ASN][1000 genomes]
rs11200972	0.85[ASN][1000 genomes]
rs11200974	0.92[ASN][1000 genomes]
rs11200977	0.84[ASN][1000 genomes]
rs11200979	0.86[ASN][1000 genomes]
rs11200980	0.88[ASN][1000 genomes]
rs11200982	0.92[ASN][1000 genomes]
rs11200984	0.92[ASN][1000 genomes]
rs11200985	0.92[ASN][1000 genomes]
rs11201000	0.92[ASN][1000 genomes]
rs11201012	0.92[ASN][1000 genomes]
rs11201025	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12218540	0.92[ASN][1000 genomes]
rs12219080	0.84[ASN][1000 genomes]
rs12240866	0.92[ASN][1000 genomes]
rs12243433	0.92[ASN][1000 genomes]
rs12243538	0.92[ASN][1000 genomes]
rs12245076	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12245535	0.92[ASN][1000 genomes]
rs12259355	0.80[ASN][1000 genomes]
rs12264259	0.92[ASN][1000 genomes]
rs12264378	0.92[ASN][1000 genomes]
rs12412226	0.83[AMR][1000 genomes]
rs12416493	0.83[AMR][1000 genomes]
rs17884887	0.82[ASN][1000 genomes]
rs1885549	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1885551	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1885552	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1998374	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2181204	0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2181205	0.84[ASN][1000 genomes]
rs28715525	0.92[ASN][1000 genomes]
rs3793925	0.82[ASN][1000 genomes]
rs3923564	0.92[ASN][1000 genomes]
rs3934643	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4325265	0.92[ASN][1000 genomes]
rs4335481	0.92[ASN][1000 genomes]
rs4369337	0.91[ASN][1000 genomes]
rs4379774	0.92[ASN][1000 genomes]
rs4387301	0.83[AMR][1000 genomes]
rs4442488	0.92[ASN][1000 genomes]
rs4466773	0.92[ASN][1000 genomes]
rs4466774	0.92[ASN][1000 genomes]
rs4520539	0.83[AMR][1000 genomes]
rs59169164	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61858841	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61860416	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61860420	0.83[AMR][1000 genomes]
rs61860421	0.83[AMR][1000 genomes]
rs6413523	0.84[ASN][1000 genomes]
rs723192	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs726014	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs958865	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9651447	0.91[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000235924	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)