SNP Report

Basic Infomation

Name	rs10887294 dbSNP
Location	chr:10,81747337
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 33)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10887226	0.83[EUR][1000 genomes]
rs10887297	0.92[ASN][1000 genomes]
rs11200971	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11200974	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11200979	0.83[EUR][1000 genomes]
rs11200980	0.83[EUR][1000 genomes]
rs11200982	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11200984	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11200985	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11201000	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11201012	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12218540	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12219080	0.83[EUR][1000 genomes]
rs12240866	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12243433	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12243538	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12245535	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12259355	0.90[ASN][1000 genomes]
rs12264259	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12264378	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2181205	0.83[EUR][1000 genomes]
rs28715525	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3923564	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4325265	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4335481	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4369337	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4379774	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4442488	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4466773	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4466774	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6413523	0.83[EUR][1000 genomes]
rs726288	0.83[EUR][1000 genomes]
rs9651447	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
SFTPD	Proximal transcriptional regulation
ENSG00000225100	Proximal transcriptional regulation
ENSG00000225100	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)