SNP Report
Basic Infomation
| Name | rs726288 dbSNP |
|---|---|
| Location | chr:10,81706973 |
| Allele | C/T |
LD-proxy of rSNPs(r2>0.8) (count: 40)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10887226 | 0.90[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs10887294 | 0.83[EUR][1000 genomes] |
| rs11200971 | 1.00[EUR][1000 genomes] |
| rs11200972 | 0.93[EUR][1000 genomes] |
| rs11200974 | 1.00[EUR][1000 genomes] |
| rs11200977 | 0.96[EUR][1000 genomes] |
| rs11200979 | 1.00[EUR][1000 genomes] |
| rs11200980 | 1.00[EUR][1000 genomes] |
| rs11200982 | 1.00[EUR][1000 genomes] |
| rs11200984 | 1.00[EUR][1000 genomes] |
| rs11200985 | 1.00[EUR][1000 genomes] |
| rs11201000 | 1.00[EUR][1000 genomes] |
| rs11201012 | 1.00[EUR][1000 genomes] |
| rs12218540 | 1.00[EUR][1000 genomes] |
| rs12219080 | 1.00[EUR][1000 genomes] |
| rs12240866 | 1.00[EUR][1000 genomes] |
| rs12243433 | 1.00[EUR][1000 genomes] |
| rs12243538 | 1.00[EUR][1000 genomes] |
| rs12245535 | 1.00[EUR][1000 genomes] |
| rs12259284 | 0.94[CHB][hapmap];0.81[AMR][1000 genomes] |
| rs12261337 | 0.81[AMR][1000 genomes] |
| rs12264259 | 1.00[EUR][1000 genomes] |
| rs12264378 | 1.00[EUR][1000 genomes] |
| rs17878456 | 1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.85[ASN][1000 genomes] |
| rs17884887 | 0.90[AMR][1000 genomes];0.86[EUR][1000 genomes] |
| rs2181205 | 0.90[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs28715525 | 1.00[EUR][1000 genomes] |
| rs3793925 | 0.90[AMR][1000 genomes];0.86[EUR][1000 genomes] |
| rs3923564 | 1.00[EUR][1000 genomes] |
| rs4325265 | 1.00[EUR][1000 genomes] |
| rs4335481 | 1.00[EUR][1000 genomes] |
| rs4369337 | 1.00[EUR][1000 genomes] |
| rs4379774 | 1.00[EUR][1000 genomes] |
| rs4442488 | 1.00[EUR][1000 genomes] |
| rs4466773 | 1.00[EUR][1000 genomes] |
| rs4466774 | 1.00[EUR][1000 genomes] |
| rs6413523 | 1.00[EUR][1000 genomes] |
| rs7911085 | 0.93[CHB][hapmap];0.83[JPT][hapmap] |
| rs911886 | 0.90[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs9651447 | 1.00[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| MBL1P | RNA binding protein mediated regulation |
| SFTPD | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014