SNP Report
Name | rs1343630   dbSNP |
---|---|
Location | chr:1,114105855 |
Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10858003 | 0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs10858006 | 0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs11102667 | 0.83[ASN][1000 genomes] |
rs1146183 | 0.82[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes] |
rs1146184 | 0.82[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes] |
rs1146185 | 0.82[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes] |
rs12026423 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs1217194 | 0.83[ASN][1000 genomes] |
rs1217202 | 0.94[ASN][1000 genomes] |
rs1217212 | 0.92[ASN][1000 genomes] |
rs1217224 | 0.92[ASN][1000 genomes] |
rs1217225 | 0.86[YRI][hapmap] |
rs1217229 | 0.94[ASN][1000 genomes] |
rs1217231 | 0.88[YRI][hapmap] |
rs1217238 | 0.92[ASN][1000 genomes] |
rs1230673 | 0.82[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.83[ASN][1000 genomes] |
rs1235000 | 0.82[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.94[ASN][1000 genomes] |
rs1237290 | 0.94[ASN][1000 genomes] |
rs13524 | 0.82[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.81[ASN][1000 genomes] |
rs1624335 | 0.82[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.86[ASN][1000 genomes] |
rs1743594 | 1.00[JPT][hapmap];0.87[YRI][hapmap];0.83[ASN][1000 genomes] |
rs1743595 | 0.84[ASN][1000 genomes] |
rs1777239 | 0.88[ASN][1000 genomes] |
rs2636003 | 0.82[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.83[ASN][1000 genomes] |
rs2798137 | 0.86[ASN][1000 genomes] |
rs7518766 | 0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs9429525 | 0.88[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
MAGI3 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014