SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 25)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10858003	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10858004	0.82[EUR][1000 genomes]
rs10858006	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11102667	0.80[ASN][1000 genomes]
rs1146183	0.82[ASN][1000 genomes]
rs1146185	0.82[ASN][1000 genomes]
rs12026423	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1217194	0.80[ASN][1000 genomes]
rs1217202	0.92[ASN][1000 genomes]
rs1217212	0.90[ASN][1000 genomes]
rs1217224	0.90[ASN][1000 genomes]
rs1217229	0.92[ASN][1000 genomes]
rs1217238	0.98[ASN][1000 genomes]
rs1230673	0.80[ASN][1000 genomes]
rs1235000	0.92[ASN][1000 genomes]
rs1237290	0.92[ASN][1000 genomes]
rs12757859	0.84[ASN][1000 genomes]
rs1343630	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1624335	0.84[ASN][1000 genomes]
rs1743594	0.80[ASN][1000 genomes]
rs1743595	0.90[ASN][1000 genomes]
rs1777239	0.86[ASN][1000 genomes]
rs2636003	0.80[ASN][1000 genomes]
rs2798137	0.84[ASN][1000 genomes]
rs9429525	0.86[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
MAGI3	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)