SNP Report
Name | rs12708652   dbSNP |
---|---|
Location | chr:16,23832466 |
Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11074578 | 0.81[CEU][hapmap];0.83[CHB][hapmap] |
rs11642116 | 0.83[CHB][hapmap] |
rs152041 | 0.82[CHB][hapmap] |
rs152042 | 0.83[CHB][hapmap] |
rs194792 | 0.81[CEU][hapmap];0.83[CHB][hapmap];0.82[CHD][hapmap] |
rs194793 | 0.81[CEU][hapmap];0.83[CHB][hapmap] |
rs194797 | 0.83[CHB][hapmap] |
rs2023671 | 0.82[EUR][1000 genomes] |
rs2188357 | 0.82[EUR][1000 genomes] |
rs2188358 | 0.82[TSI][hapmap];0.82[EUR][1000 genomes] |
rs2575382 | 0.97[ASN][1000 genomes] |
rs2575384 | 1.00[CHB][hapmap];0.87[JPT][hapmap];0.96[ASN][1000 genomes] |
rs34224029 | 0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs3891380 | 0.96[ASN][1000 genomes] |
rs4081534 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs59043745 | 0.96[ASN][1000 genomes] |
rs6497687 | 0.82[EUR][1000 genomes] |
rs6497688 | 0.82[EUR][1000 genomes] |
rs7184668 | 0.82[EUR][1000 genomes] |
rs7184949 | 0.82[EUR][1000 genomes] |
rs7185142 | 0.81[EUR][1000 genomes] |
rs7185480 | 0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs7185969 | 0.82[EUR][1000 genomes] |
rs7189218 | 0.81[EUR][1000 genomes] |
rs7196602 | 0.82[CHB][hapmap] |
rs9927848 | 0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];0.84[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs9927993 | 0.80[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs9933339 | 0.86[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
PRKCB | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014