SNP Report
Name | rs1177274   dbSNP |
---|---|
Location | chr:2,61368532 |
Allele | T/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10496092 | 0.88[GIH][hapmap];0.82[MEX][hapmap] |
rs11498 | 0.94[ASW][hapmap];1.00[LWK][hapmap];0.96[YRI][hapmap];0.92[AFR][1000 genomes] |
rs1177273 | 0.87[AFR][1000 genomes] |
rs1177285 | 0.84[ASW][hapmap] |
rs1615070 | 0.84[ASW][hapmap];0.84[LWK][hapmap] |
rs1621048 | 0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs1665269 | 0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs1729655 | 0.88[AFR][1000 genomes] |
rs1729656 | 0.89[AFR][1000 genomes] |
rs1729658 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];0.86[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs1729660 | 0.89[ASW][hapmap];0.98[LWK][hapmap];0.90[YRI][hapmap];0.90[AFR][1000 genomes] |
rs1729662 | 1.00[CEU][hapmap];0.85[CHD][hapmap];0.98[GIH][hapmap];0.96[MEX][hapmap];1.00[TSI][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs1729674 | 0.81[LWK][hapmap] |
rs2049747 | 0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs2167566 | 0.86[GIH][hapmap] |
rs2441467 | 0.96[YRI][hapmap];0.91[AFR][1000 genomes] |
rs2592491 | 0.89[AFR][1000 genomes] |
rs2600665 | 0.88[GIH][hapmap];0.87[MEX][hapmap] |
rs2698197 | 1.00[CEU][hapmap];0.85[JPT][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs3213944 | 0.96[YRI][hapmap];0.92[AFR][1000 genomes] |
rs34279970 | 0.92[AFR][1000 genomes] |
rs3889717 | 0.81[LWK][hapmap] |
rs6739427 | 0.86[GIH][hapmap];0.87[MEX][hapmap] |
rs720201 | 0.88[ASW][hapmap];0.81[LWK][hapmap] |
rs777585 | 0.88[GIH][hapmap];0.87[MEX][hapmap] |
rs777588 | 0.88[CEU][hapmap] |
rs777589 | 0.88[GIH][hapmap];0.91[MEX][hapmap] |
rs777591 | 0.88[GIH][hapmap];0.91[MEX][hapmap] |
Symbol | Regulation type |
---|---|
KIAA1841 | Proximal transcriptional regulation |
C2orf74 | Proximal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014