SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 17)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11637445	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs11856740	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13379682	1.00[ASN][1000 genomes]
rs16951001	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];1.00[MEX][hapmap];0.98[TSI][hapmap];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17241403	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];0.98[TSI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17241808	0.82[MEX][hapmap]
rs1878699	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.86[MEX][hapmap];1.00[TSI][hapmap];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2166185	1.00[ASN][1000 genomes]
rs28730809	1.00[ASN][1000 genomes]
rs55986190	1.00[ASN][1000 genomes]
rs56038097	1.00[ASN][1000 genomes]
rs57030473	1.00[ASN][1000 genomes]
rs66926990	1.00[ASN][1000 genomes]
rs72745452	1.00[ASN][1000 genomes]
rs72745473	1.00[ASN][1000 genomes]
rs956129	1.00[ASN][1000 genomes]
rs9652480	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
MAP2K5	Proximal transcriptional regulation
MAP2K5	Distal transcriptional regulation
MAP2K5	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 3)