SNP Report
Name | rs10858015   dbSNP |
---|---|
Location | chr:1,114267951 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10776773 | 0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs11102667 | 0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs11102678 | 0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs1146183 | 0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs1146184 | 0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs1146185 | 0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs1217375 | 0.81[AFR][1000 genomes];0.87[ASN][1000 genomes] |
rs1230673 | 0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs1230681 | 0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs1230684 | 0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs12757859 | 0.83[AFR][1000 genomes];0.81[EUR][1000 genomes] |
rs13524 | 0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs1624335 | 0.84[AFR][1000 genomes];0.80[ASN][1000 genomes] |
rs1743594 | 0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs1746857 | 0.85[ASN][1000 genomes] |
rs1777239 | 0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs1935836 | 0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs1970559 | 0.81[ASN][1000 genomes] |
rs2040041 | 0.85[ASN][1000 genomes] |
rs2476599 | 0.89[ASN][1000 genomes] |
rs2636000 | 0.85[ASN][1000 genomes] |
rs2636003 | 0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs2798137 | 0.80[ASN][1000 genomes] |
rs3789597 | 0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs9429525 | 0.82[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
PHTF1 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014