SNP Report

Basic Infomation

Name	rs9651726 dbSNP
Location	chr:11,61069358
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 64)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1037448	0.91[LWK][hapmap]
rs10792312	0.88[ASW][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.80[MKK][hapmap]
rs10897150	1.00[JPT][hapmap]
rs10897158	0.82[LWK][hapmap]
rs1108769	1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs11230650	0.81[ASW][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.80[YRI][hapmap];0.83[AFR][1000 genomes]
rs11230658	0.81[ASW][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.80[MKK][hapmap];0.81[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs11230659	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs11230664	0.88[ASW][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.80[MKK][hapmap];0.83[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs11230666	1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs1132797	0.80[ASN][1000 genomes]
rs11822158	1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs12275843	1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs12277294	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs12286866	0.85[ASN][1000 genomes]
rs12289370	0.81[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs12290116	0.85[ASN][1000 genomes]
rs12291333	0.81[ASN][1000 genomes]
rs12791961	0.82[LWK][hapmap]
rs2260655	1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs2286878	1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs2305465	1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs2508466	0.83[CHD][hapmap]
rs2512809	0.82[ASW][hapmap];1.00[CHD][hapmap];0.86[LWK][hapmap];0.81[ASN][1000 genomes]
rs2512811	1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs2512812	0.85[ASN][1000 genomes]
rs2513329	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs2513330	1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs2860519	0.82[LWK][hapmap]
rs28720249	0.80[ASN][1000 genomes]
rs28720255	0.80[ASN][1000 genomes]
rs28720261	0.80[ASN][1000 genomes]
rs28720297	0.80[ASN][1000 genomes]
rs28720301	0.80[ASN][1000 genomes]
rs28720334	0.80[ASN][1000 genomes]
rs28720346	0.80[ASN][1000 genomes]
rs28720355	0.80[ASN][1000 genomes]
rs3017602	0.82[LWK][hapmap]
rs3019198	0.82[LWK][hapmap]
rs3741268	1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs3972757	1.00[CHD][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs4939513	0.81[ASW][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];0.80[YRI][hapmap];0.81[ASN][1000 genomes]
rs4939514	1.00[CHD][hapmap];0.85[ASN][1000 genomes]
rs4939515	0.85[ASN][1000 genomes]
rs4939517	1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap]
rs56269746	0.80[ASN][1000 genomes]
rs56352432	0.85[ASN][1000 genomes]
rs61554568	0.80[ASN][1000 genomes]
rs61744427	0.85[ASN][1000 genomes]
rs6591650	0.85[ASN][1000 genomes]
rs6591651	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs7107608	0.85[ASN][1000 genomes]
rs7108142	1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs7108797	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs7111608	1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.81[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs7118023	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs7120594	0.85[ASN][1000 genomes]
rs73490303	0.85[ASN][1000 genomes]
rs7397033	0.85[ASN][1000 genomes]
rs7607	0.82[LWK][hapmap]
rs7934735	0.85[ASN][1000 genomes]
rs7951574	0.88[ASW][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.80[ASN][1000 genomes]
rs879647	0.82[LWK][hapmap]
rs9704187	0.85[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
VWCE	Distal transcriptional regulation
DDB1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)