SNP Report

Basic Infomation

Name	rs940584 dbSNP
Location	chr:1,201194248
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 42)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10753896	0.81[AMR][1000 genomes]
rs10753897	0.81[AMR][1000 genomes]
rs10920109	1.00[ASN][1000 genomes]
rs10920111	1.00[ASN][1000 genomes]
rs10920113	1.00[ASN][1000 genomes]
rs10920144	0.83[AMR][1000 genomes]
rs10920158	1.00[ASN][1000 genomes]
rs11577079	1.00[ASN][1000 genomes]
rs11579279	1.00[ASN][1000 genomes]
rs12119957	1.00[ASN][1000 genomes]
rs12134361	1.00[CEU][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12138260	1.00[ASN][1000 genomes]
rs12724643	1.00[ASN][1000 genomes]
rs12737797	1.00[ASN][1000 genomes]
rs12737822	1.00[ASN][1000 genomes]
rs12742169	1.00[ASN][1000 genomes]
rs12742170	1.00[ASN][1000 genomes]
rs12743065	1.00[ASN][1000 genomes]
rs12743376	1.00[ASN][1000 genomes]
rs2039959	0.81[AMR][1000 genomes]
rs2365641	0.90[AFR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35400505	1.00[ASN][1000 genomes]
rs35524696	0.85[AMR][1000 genomes]
rs3730237	1.00[ASN][1000 genomes]
rs3738268	0.83[AMR][1000 genomes]
rs41267497	1.00[ASN][1000 genomes]
rs41267503	1.00[ASN][1000 genomes]
rs4915224	0.81[AMR][1000 genomes]
rs4915497	0.81[AMR][1000 genomes]
rs4915498	0.95[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6427885	0.81[AMR][1000 genomes]
rs6427889	0.83[AMR][1000 genomes]
rs6427890	0.95[AFR][1000 genomes];0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6667020	0.83[AMR][1000 genomes]
rs6687494	0.91[CEU][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6687886	0.81[CEU][hapmap];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6692846	0.81[AMR][1000 genomes]
rs71635533	1.00[ASN][1000 genomes]
rs7415038	1.00[ASN][1000 genomes]
rs9427712	1.00[ASN][1000 genomes]
rs9427713	1.00[ASN][1000 genomes]
rs9427714	1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000229821	Proximal transcriptional regulation
IGFN1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)