SNP Report

Basic Infomation

Name	rs883927 dbSNP
Location	chr:2,65342213
Allele	A/C

LD-proxy of rSNPs(r²>0.8) (count: 24)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10189514	0.81[YRI][hapmap]
rs11890484	0.88[YRI][hapmap];1.00[AMR][1000 genomes]
rs11896135	1.00[AMR][1000 genomes]
rs11896233	1.00[AMR][1000 genomes]
rs11897778	0.89[YRI][hapmap];1.00[AMR][1000 genomes]
rs11903681	0.90[YRI][hapmap];1.00[AMR][1000 genomes]
rs13389745	0.89[YRI][hapmap]
rs13409078	1.00[YRI][hapmap]
rs17029820	0.82[YRI][hapmap]
rs17029860	0.90[YRI][hapmap];0.84[AFR][1000 genomes]
rs17029863	0.89[YRI][hapmap]
rs17029896	1.00[AMR][1000 genomes]
rs17029951	0.94[YRI][hapmap];1.00[AMR][1000 genomes]
rs17029975	0.83[YRI][hapmap]
rs57113398	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57810066	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58992243	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59085177	1.00[AMR][1000 genomes]
rs59476922	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6729150	1.00[AMR][1000 genomes]
rs73936409	0.86[AFR][1000 genomes]
rs73936418	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73936426	0.83[AFR][1000 genomes]
rs73936428	1.00[AMR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)