SNP Report
Name | rs7958521   dbSNP |
---|---|
Location | chr:12,48877400 |
Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10875833 | 0.82[EUR][1000 genomes] |
rs11168599 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11168637 | 0.92[CEU][hapmap];0.84[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes] |
rs11458 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12371700 | 0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs12815151 | 0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs12815544 | 0.92[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes] |
rs1895996 | 0.82[EUR][1000 genomes] |
rs2114322 | 0.93[CEU][hapmap];0.84[CHB][hapmap];0.94[JPT][hapmap];0.81[EUR][1000 genomes] |
rs2731091 | 0.92[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes] |
rs2731094 | 0.92[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes] |
rs2731095 | 0.85[ASN][1000 genomes] |
rs2731097 | 0.84[ASN][1000 genomes] |
rs2731102 | 0.92[CHB][hapmap];0.94[JPT][hapmap] |
rs2731107 | 0.85[ASN][1000 genomes] |
rs35338015 | 0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs57444623 | 0.99[ASN][1000 genomes] |
rs6580671 | 1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs7302209 | 0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7312017 | 0.94[JPT][hapmap] |
rs7972785 | 0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs7974213 | 0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs9268 | 0.84[CHB][hapmap];0.80[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
C12orf54 | Proximal transcriptional regulation |
RPS10P20 | Proximal transcriptional regulation |
ENSG00000258121 | RNA binding protein mediated regulation |
C12orf54 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014