SNP Report
Basic Infomation
| Name | rs57444623 dbSNP |
|---|---|
| Location | chr:12,48905974 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 15)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11168599 | 0.99[ASN][1000 genomes] |
| rs11458 | 0.99[ASN][1000 genomes] |
| rs12371700 | 0.96[ASN][1000 genomes] |
| rs12815151 | 0.96[ASN][1000 genomes] |
| rs2731091 | 0.84[ASN][1000 genomes] |
| rs2731094 | 0.84[ASN][1000 genomes] |
| rs2731095 | 0.84[ASN][1000 genomes] |
| rs2731097 | 0.83[ASN][1000 genomes] |
| rs2731107 | 0.84[ASN][1000 genomes] |
| rs35338015 | 0.87[ASN][1000 genomes] |
| rs6580671 | 0.90[ASN][1000 genomes] |
| rs7302209 | 0.99[ASN][1000 genomes] |
| rs7958521 | 0.99[ASN][1000 genomes] |
| rs7972785 | 0.96[ASN][1000 genomes] |
| rs7974213 | 0.99[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| OR8S1 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014