SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 25)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11186011	0.96[ASN][1000 genomes]
rs11186034	0.87[CHB][hapmap];0.94[JPT][hapmap]
rs11186045	1.00[CEU][hapmap];0.93[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12260841	0.93[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs12412983	0.97[ASN][1000 genomes]
rs12413288	0.93[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs1870136	0.93[CHB][hapmap];0.89[CHD][hapmap];0.89[JPT][hapmap];0.91[ASN][1000 genomes]
rs2343527	0.81[CHB][hapmap];0.88[JPT][hapmap];0.84[ASN][1000 genomes]
rs2343555	0.91[ASN][1000 genomes]
rs45526031	0.90[EUR][1000 genomes]
rs60575307	0.83[ASN][1000 genomes]
rs61372324	0.90[EUR][1000 genomes]
rs6586067	0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7079069	0.91[ASN][1000 genomes]
rs7079232	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7097741	0.87[ASN][1000 genomes]
rs7098909	0.93[CHB][hapmap];0.95[CHD][hapmap];0.89[JPT][hapmap];0.92[ASN][1000 genomes]
rs7099612	0.88[ASN][1000 genomes]
rs72805709	0.90[EUR][1000 genomes]
rs72805712	0.90[EUR][1000 genomes]
rs72805715	0.90[EUR][1000 genomes]
rs73307107	0.83[ASN][1000 genomes]
rs7895413	1.00[CEU][hapmap];0.94[TSI][hapmap];0.90[EUR][1000 genomes]
rs7900954	0.86[CHB][hapmap]
rs7905288	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
SH2D4B	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 1)