SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs17259459	0.87[EUR][1000 genomes]
rs173355	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs242599	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs242605	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs242607	0.91[EUR][1000 genomes]
rs242608	0.87[EUR][1000 genomes]
rs242609	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs381619	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs442268	0.80[EUR][1000 genomes]
rs6058523	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6061154	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs6089171	0.81[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
HCK	Distal transcriptional regulation
HCK	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)