SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs17259459	0.87[ASW][hapmap];0.95[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];0.97[TSI][hapmap];0.91[YRI][hapmap];0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs173355	0.92[EUR][1000 genomes]
rs242599	0.90[CEU][hapmap];0.86[GIH][hapmap];0.84[MEX][hapmap];0.94[TSI][hapmap];0.87[EUR][1000 genomes]
rs242607	0.89[CEU][hapmap];0.87[EUR][1000 genomes]
rs242608	0.90[CEU][hapmap];0.87[GIH][hapmap];0.97[TSI][hapmap];0.91[EUR][1000 genomes]
rs242609	0.90[CEU][hapmap];0.94[GIH][hapmap];0.92[MEX][hapmap];0.95[TSI][hapmap];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs381619	0.84[EUR][1000 genomes]
rs442268	0.84[EUR][1000 genomes]
rs6119758	0.81[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
HCK	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 1)